# https://editorconfig.org
root = true

# Global defaults
[*]
charset = utf-8
end_of_line = lf
indent_style = space
indent_size = 4
trim_trailing_whitespace = true
insert_final_newline = true

# Python
[*.{py,pyi}]
indent_size = 4
max_line_length = 88

[*.ipynb]
indent_size = 2

# Config / markup
[*.{yml,yaml}]
indent_size = 2

[*.{toml,cfg,ini}]
indent_size = 4

[*.json]
indent_size = 2

[*.{md,rst}]
trim_trailing_whitespace = false

# Shell / scripts
[*.{sh,bash,zsh}]
indent_size = 2
end_of_line = lf

[*.{bat,cmd,ps1}]
end_of_line = crlf

# Web / docs
[*.{html,htm,xml,css,js,ts}]
indent_size = 2

[*.svg]
indent_size = 2

# Structural biology: text formats
[*.{pdb,ent,cif,mmcif}]
indent_style = unset
indent_size = unset
trim_trailing_whitespace = false

# Cheminformatics
[*.{sdf,mol,mol2}]
indent_style = unset
indent_size = unset
trim_trailing_whitespace = false

[*.{smi,sln,mae}]
indent_size = 4

# Data files
[*.{csv,tsv}]
trim_trailing_whitespace = false
indent_style = unset
indent_size = unset

# Patches and special files
[*.{diff,patch}]
trim_trailing_whitespace = false
end_of_line = unset

[{LICENSE,LICENSE.md,COPYING}]
insert_final_newline = false

[*.{log,out}]
trim_trailing_whitespace = false
insert_final_newline = false