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feat: minted keys, VRF seeds, RFC 9162 proofs, history roots, tag URIs and a transparency log

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Keys (spec/02 §2.4), the rule paperstack settled on:
- A work key is a Scholar-style citation key, a hyphen and the first four
  Crockford base32 characters of SHA-256("scienting-key/1:" + identity),
  where the identity is the first of doi, arxiv, isbn, pmid, pmcid and
  openalex in same_as, else the folded title, year and family name. A
  collision lengthens the later key by two characters; a key is minted
  once and never recomputed. A document key adds .si, .v<seq> or .<type>
  for versions other than the version of record.
- Every fixture key is now minted (hale2026harmonic-damb,
  okafor2025solvent-acth, writer2027fixed-ynr7.v3, tiny2026tiny-j4qm), so
  every node and record ID was re-minted and the docs rewritten to match.
  The validator checks the document key against the work key and version
  (doc.key.work) and the hash part against the identifier (doc.key.suffix).
  vectors/keys.jsonl pins the cases paperstack's tests pin.

Review:
- Spot-check seeds are ECVRF-EDWARDS25519-SHA512-TAI proofs (RFC 9381),
  implemented in tools/oracle/vrf.py in plain Python and reproduced
  against the RFC's Example 16; the sample ranks by the VRF output. The
  earlier Ed25519 seed could be ground by a dishonest checker.
- RFC 9162 inclusion and consistency proofs (crypto.inclusion_path,
  verify_inclusion, consistency_proof, verify_consistency) with
  scienting-proof/1, vectors/proofs.jsonl and two fixture records.
- document.json carries `history`, the root over the corrections, with
  the empty-tree hash for none (spec/11 §11.5, rule doc.history).
- A provisional transparency log (spec/23): log entries, signed-note
  checkpoints with key hashes as transparency logs share them, the rule
  that a logged revocation beats a self-asserted time, and vectors.
- Reserved signature schemes cose and ml-dsa-65 (spec/08 §8.4).

Identifiers and text:
- urn:scienting: becomes tag:scient.ing,2026: (RFC 4151), since the URN
  namespace was never registered.
- Unicode 16.0 is pinned for normalization and categories (spec/01 §1.4);
  the checker refuses another version.

Checking:
- check.py: keys, proofs, VRF and checkpoint vectors; the proof and
  checkpoint records; a check that every ID and hash the prose quotes
  exists in the fixtures or vectors; three more broken packages
  (history-wrong, key-suffix, key-work).
- stress.py: key, VRF, proof and checkpoint properties.
- Docs: a keys section in the concepts and FAQ, rationale entries for
  keys, VRF, proofs, tag URIs and the Unicode pin, a "Looking ahead"
  section, media-type registration and OCI distribution notes.

Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
This commit is contained in:
alexmandClaude committed 2026-10-14 23:21:57 -04:00
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commit a09d158e16
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fixtures/packages/hale2026harmonic.checks-only/document.json
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fixtures/packages/hale2026harmonic/datasets/ds-hale-bond-params/data.csv
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key,bond,set,k_r,r_eq
ct-ct-a,CT–CT,A,310.0,1.526
ct-ct-b,CT–CT,B,305.2,1.5260
ct-hc-a,CT–HC,A,340.0,1.090
ct-hc-b,CT–HC,B,338.7,1.0900
ow-hw-a,OW–HW,A,553.0,0.9572
ow-hw-b,OW–HW,B,548.1,0.9570
1 key bond set k_r r_eq
2 ct-ct-a CT–CT A 310.0 1.526
3 ct-ct-b CT–CT B 305.2 1.5260
4 ct-hc-a CT–HC A 340.0 1.090
5 ct-hc-b CT–HC B 338.7 1.0900
6 ow-hw-a OW–HW A 553.0 0.9572
7 ow-hw-b OW–HW B 548.1 0.9570
fixtures/packages/hale2026harmonic/datasets/ds-hale-bond-params/datapackage.json
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fixtures/packages/hale2026harmonic/nodes.jsonl
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fixtures/packages/tiny2026example/provenance.json
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fixtures/packages/tiny2026example/receipts.jsonl
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fixtures/packages/tiny2026example/references.jsonl
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fixtures/packages/tiny2026example/roster.json
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fixtures/packages/tiny2026example/witnesses.json
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