The oracle had two import names, `tools.oracle` for the tools and
`paperspec` for other repositories, which could load the same code twice
in one process and needed a gate keyed on the module name. It now lives
in the standard src layout under its one name.
- git mv tools/oracle -> src/paperspec; the 22 rule modules are unchanged.
- The tools import `paperspec`. `tools/__init__.py` now holds the Python
3.14 and cryptography/jsonschema check and puts src/ first on sys.path,
so the tools run this checkout's code with or without pixi. The
package's own __init__ checks nothing and exposes __version__.
- pyproject.toml: version from git tags via setuptools-scm
(guess-next-dev, node-and-timestamp, src/paperspec/_version.py,
gitignored). The packages stay listed rather than found because
schemas/, sql/ and vectors/ stay at the root: the spec links to them and
the site serves the schemas at their $id URLs.
- pixi.toml: a `dev` feature and environment with setuptools,
setuptools-scm and python-build, and `pixi run -e dev wheel`.
- check.py scans src/paperspec for rule IDs; README, CONTRIBUTING, the
FAQ, the overview, the vectors and tools READMEs and the changelog point
at the new path. The FAQ no longer says the oracle is not a library.
pixi.lock is not re-solved in this commit: with a dynamic version, pixi
builds the package metadata to lock, which needs the conda environment
installed. Run `pixi lock` and commit the result before pushing; the site
workflow installs with --locked.
pixi run check passes; no computed value, vector, fixture, schema or SQL
file changed.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
- hashing.algorithm names the hash function in every document; a consumer refuses one it does not implement (doc.hash.algorithm)
- ML-DSA-65 (FIPS 204) is an implemented signature scheme: pure-Python reference in tools/oracle/mldsa.py checked against NIST ACVP vectors, a receipt signed by the new roster key dana, and signature vectors for key generation and a deterministic signature
- roster keys may carry a did:key, which the validator checks against the public key (doc.roster.did), and a witness purpose for parties that cosign log checkpoints
- model provenance: a correction's author and an annotation's generator name the model with provider, version and the hashes of its weights, prompt and parameters, and where it ran
- the transparency log gains the tlog-tiles static layout (fixtures/records/log/), a project settings.log with origin, witnesses and threshold, and an acceptance rule; the fixture checkpoint is cosigned by a witness
- store.sql: roster_keys accepts cose and ml-dsa-65 and gains a did column
- spec chapters 01, 08, 11, 18, 20 and 23, the rationale, glossary, fixture, vector and tool guides updated; stress harness covers ML-DSA
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
- Add tools/validate.py: validates packages, and with --correction runs
proposed corrections through the gate against a package without
writing anything (spec/11 §11.4). The gate now refuses a proposal that
fails the correction schema, rule correction.schema.
- tools/load.py validates every package before loading, and with
--bundle --built-from builds a scienting-bundle/1 with the FTS5 search
index and bundle_meta (spec/13 §13.5). Search rows are defined per
unit (sentence, cell, equation outside a sentence, figure-text) with
the parent kind as context.
- Roster keys carry a role, and a key with the role owner may revoke any
receipt (spec/08 §8.7, spec/20); roster schema, store table and the
fixture roster updated. The checker signs a trial revocation to prove
the rule both ways.
- A qa: receipt raises the nodes it sampled except those in its errors
(spec/08 §8.2); the example paper's fidelity counts become 27 F3,
13 F2, 4 F1 and 1 F0.
- The destination chooses the keyed scheme, not the text policy:
hmac-team between the team's machines, hkdf-pages outside the team
(spec/05 §5.8, spec/12 §12.5).
- A TextQuoteSelector must repeat the anchor's plain quote and is absent
for hashed or keyed anchors (spec/18 §18.3).
- Add fixtures/records/suspect.json, a scienting-suspect/1 record.
- Oracle: hashes are kept incrementally and checked after every
correction against a full recomputation; load and write refuse unsafe
manifest paths; Ed25519, HKDF and schema validation come from the
cryptography and jsonschema packages; canonical JSON uses the built-in
encoder with an exact RFC 8785 fallback.
- The tools need Python 3.14 with cryptography and jsonschema; the py310
CI environment is dropped and the workflow runs the default only.
- Resolve every [CHECK] note in the docs, READMEs and context; add
CONTRIBUTING.md; every tool answers --help and refuses unknown options.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
alexm
