Files
alexmandClaude 516148146f feat: publish the package from CI, and clean up its references
Publishing
- .gitea/workflows/publish.yml publishes paperspec to the instance's PyPI
  registry (/api/packages/infra/pypi) when a v* tag is pushed: it checks
  the repository, builds the sdist and wheel, refuses to upload unless the
  built version equals the tag, runs twine check --strict, and uploads
  with the secrets PACKAGE_USER and PACKAGE_TOKEN (--skip-existing, so a
  rerun on the same tag is safe). Run by hand, it refuses anything but a
  tag.
- pixi dev environment: twine >= 6.1 (the first that reads Metadata 2.4),
  and `dist` (sdist and wheel) replaces the `wheel` task.
- deploy/README.md: how to set up the secrets, release a version, and
  install from the registry with pixi, uv or pip, tying paperspec to the
  registry where the installer allows it.
- CONTRIBUTING.md "Releasing": a tag versions the package; a format
  change takes the new format version as the top CHANGELOG heading, and a
  code-only release takes the next patch as a subsection, as 0.1.1 does.
- pyproject: fallback_version 0+unknown for source trees without git; the
  license expression is Apache-2.0 AND CC0-1.0, for the code and the data
  the wheel carries.

Cleanup (from an audit of every reference to the package)
- spec/00 lists src/ (the package) and tools/ (how to run it), and no
  longer says the reference implementation is not a library.
- Stale explanations fixed in pixi.toml, .gitignore, the Caddyfile, the
  vectors, context, sql and tools READMEs, docs/examples.md, docs/faq.md,
  spec/01, docs/rationale.md and docs/comparison.md: the commands, what
  they need (the tools extra), the fixture folder hale2026harmonic-damb,
  and three lines that held two sentences.
- tools/README.md counts all six commands, says what needs which extra
  (package.validate and corrections.gate need [schema]), and that the
  vectors ship but the fixtures they name do not.
- The CLI's install and clone hints point at the registry instructions and
  an https clone URL; schema.py raises an ImportError naming
  paperspec[schema], as crypto.py does for [crypto].
- check's Unicode check now guards the package's pinned constant.
- site skips build/, dist/ and *.egg-info.
- CHANGELOG 0.1.1 describes the final state.

pixi run check passes (as `python -m paperspec check`); the rebuild is
byte-identical. pixi.lock needs `pixi lock` for twine before pushing: the
publish workflow installs with --locked.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-15 09:41:26 -04:00
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The paperspec specification

This specification states exactly what each paperspec file holds and how every value in it is computed. The schemas, SQL, JSON-LD context, registries, vectors and fixtures are normative too, and each chapter says which of them it relies on. A chapter and a vector that disagree signal a bug, so please report it in the repository, https://git.scient.ing/infra/paperspec.

Two readers will get the most from it: implementers who build a reader, writer, converter or checker, and experts who want the precise rules. Newcomers should start with the guides, which explain what the formats are for. This text assumes you know why and tells you how.

Reading paths

Find the row for the job you are doing and read its chapters after those in the first row. Chapter numbers are those in the table below.

If you are writing Read
Anything at all 0, 1, 3, 4 and 5: introduction, conventions, nodes, identity and the content values.
A reader of packages Then 2, 6, 7 and 12: the model, anchors, geometry and the package.
A converter Then 9, 10 and 11: figures and tables, references, and corrections with the gate.
A store or a server Then 8, 13, 14 and 23: receipts, the database form, rights, and the transparency log.
A writer or reader of annotation, teaching or data files Then 15 to 21.
A validator Chapter 22, with registry/rules.json.

Chapters

Chapter Subject
0. Introduction Scope, conformance, versions and status, and how the repository is arranged
1. Shared conventions Canonical JSON, numbers, hashes, normalization, offsets, times, determinism, IDs, keys, files and prose
2. Works, versions, witnesses and documents The four objects; document.json and witnesses.json
3. Nodes Nodes, their kinds and children, content, attributes, inline runs and the plain projection
4. Identity Minting IDs, permanence, retirement, aliases, ids.jsonl, store-qualified names and record IDs
5. Content values The five content values, the projections, alignment, suspects, keyed hashes and the metadata hash
6. Addresses and anchors Addresses, anchors and the five resolutions, with drift
7. Geometry Page fingerprints, stamp rules, pages.jsonl and locations.jsonl
8. Fidelity, receipts and spot-checks Fidelity levels, receipts, signatures, Merkle roots, the roster, revocations, spot-checks and error bounds
9. Figures, tables and equations Figures, panels, tables, cells and equations
10. References and citations Reference nodes, references.jsonl and its resolutions, and sentence-level citations
11. Corrections Corrections and the gate
12. The package The files of a package, paths, manifest, provenance, text policies and assets
13. The database form and the bundle The database form and the SQLite bundle
14. Rights Rights records, policies, stages and backends
15. Datasets Frictionless Data Packages with units, uncertainty and origin; anchors.jsonl; content hash
16. Digitization records How values were read off a figure panel: target, axes, series, method, verification and confirmation
17. Views Vega-Lite specifications that pin their data, and optional computations
18. Layers and annotations Layers and annotations
19. Exercises, submissions and grades Exercises, submissions and grades
20. Projects Members and roles, documents, reading paths, held layers, datasets, views and drafts, and settings
21. Drafts Drafts: snapshots and sentence-ID sidecars
22. Conformance Conformance, the suite and the rule catalog
23. The transparency log A team's log of receipts, revocations and rosters, its checkpoints, and what it settles