Files
alexmandClaude a09d158e16 feat: minted keys, VRF seeds, RFC 9162 proofs, history roots, tag URIs and a transparency log
Keys (spec/02 §2.4), the rule paperstack settled on:
- A work key is a Scholar-style citation key, a hyphen and the first four
  Crockford base32 characters of SHA-256("scienting-key/1:" + identity),
  where the identity is the first of doi, arxiv, isbn, pmid, pmcid and
  openalex in same_as, else the folded title, year and family name. A
  collision lengthens the later key by two characters; a key is minted
  once and never recomputed. A document key adds .si, .v<seq> or .<type>
  for versions other than the version of record.
- Every fixture key is now minted (hale2026harmonic-damb,
  okafor2025solvent-acth, writer2027fixed-ynr7.v3, tiny2026tiny-j4qm), so
  every node and record ID was re-minted and the docs rewritten to match.
  The validator checks the document key against the work key and version
  (doc.key.work) and the hash part against the identifier (doc.key.suffix).
  vectors/keys.jsonl pins the cases paperstack's tests pin.

Review:
- Spot-check seeds are ECVRF-EDWARDS25519-SHA512-TAI proofs (RFC 9381),
  implemented in tools/oracle/vrf.py in plain Python and reproduced
  against the RFC's Example 16; the sample ranks by the VRF output. The
  earlier Ed25519 seed could be ground by a dishonest checker.
- RFC 9162 inclusion and consistency proofs (crypto.inclusion_path,
  verify_inclusion, consistency_proof, verify_consistency) with
  scienting-proof/1, vectors/proofs.jsonl and two fixture records.
- document.json carries `history`, the root over the corrections, with
  the empty-tree hash for none (spec/11 §11.5, rule doc.history).
- A provisional transparency log (spec/23): log entries, signed-note
  checkpoints with key hashes as transparency logs share them, the rule
  that a logged revocation beats a self-asserted time, and vectors.
- Reserved signature schemes cose and ml-dsa-65 (spec/08 §8.4).

Identifiers and text:
- urn:scienting: becomes tag:scient.ing,2026: (RFC 4151), since the URN
  namespace was never registered.
- Unicode 16.0 is pinned for normalization and categories (spec/01 §1.4);
  the checker refuses another version.

Checking:
- check.py: keys, proofs, VRF and checkpoint vectors; the proof and
  checkpoint records; a check that every ID and hash the prose quotes
  exists in the fixtures or vectors; three more broken packages
  (history-wrong, key-suffix, key-work).
- stress.py: key, VRF, proof and checkpoint properties.
- Docs: a keys section in the concepts and FAQ, rationale entries for
  keys, VRF, proofs, tag URIs and the Unicode pin, a "Looking ahead"
  section, media-type registration and OCI distribution notes.

Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
2026-10-14 23:21:57 -04:00

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Markdown

# The paperspec specification
This specification states exactly what each paperspec file holds and how every value in it is computed.
The schemas, SQL, JSON-LD context, registries, vectors and fixtures are normative too, and each chapter says which of them it relies on.
A chapter and a vector that disagree signal a bug, so please report it in the repository, <https://git.scient.ing/infra/paperspec>.
Two readers will get the most from it: implementers who build a reader, writer, converter or checker, and experts who want the precise rules.
Newcomers should start with the [guides](../docs/README.md), which explain what the formats are for.
This text assumes you know why and tells you how.
## Reading paths
Find the row for the job you are doing and read its chapters after those in the first row.
Chapter numbers are those in the table below.
| If you are writing | Read |
| --- | --- |
| Anything at all | 0, 1, 3, 4 and 5: introduction, conventions, nodes, identity and the content values. |
| A reader of packages | Then 2, 6, 7 and 12: the model, anchors, geometry and the package. |
| A converter | Then 9, 10 and 11: figures and tables, references, and corrections with the gate. |
| A store or a server | Then 8, 13, 14 and 23: receipts, the database form, rights, and the transparency log. |
| A writer or reader of annotation, teaching or data files | Then 15 to 21. |
| A validator | Chapter 22, with [registry/rules.json](../registry/rules.json). |
## Chapters
| Chapter | Subject |
| --- | --- |
| [0. Introduction](00-introduction.md) | Scope, conformance, versions and status, and how the repository is arranged |
| [1. Shared conventions](01-conventions.md) | Canonical JSON, numbers, hashes, normalization, offsets, times, determinism, IDs, keys, files and prose |
| [2. Works, versions, witnesses and documents](02-model.md) | The four objects; `document.json` and `witnesses.json` |
| [3. Nodes](03-nodes.md) | Nodes, their kinds and children, content, attributes, inline runs and the plain projection |
| [4. Identity](04-identity.md) | Minting IDs, permanence, retirement, aliases, `ids.jsonl`, store-qualified names and record IDs |
| [5. Content values](05-hashes.md) | The five content values, the projections, alignment, suspects, keyed hashes and the metadata hash |
| [6. Addresses and anchors](06-anchors.md) | Addresses, anchors and the five resolutions, with drift |
| [7. Geometry](07-geometry.md) | Page fingerprints, stamp rules, `pages.jsonl` and `locations.jsonl` |
| [8. Fidelity, receipts and spot-checks](08-fidelity.md) | Fidelity levels, receipts, signatures, Merkle roots, the roster, revocations, spot-checks and error bounds |
| [9. Figures, tables and equations](09-figures-tables-equations.md) | Figures, panels, tables, cells and equations |
| [10. References and citations](10-references.md) | Reference nodes, `references.jsonl` and its resolutions, and sentence-level citations |
| [11. Corrections](11-corrections.md) | Corrections and the gate |
| [12. The package](12-package.md) | The files of a package, paths, manifest, provenance, text policies and assets |
| [13. The database form and the bundle](13-database.md) | The database form and the SQLite bundle |
| [14. Rights](14-rights.md) | Rights records, policies, stages and backends |
| [15. Datasets](15-datasets.md) | Frictionless Data Packages with units, uncertainty and origin; `anchors.jsonl`; content hash |
| [16. Digitization records](16-digitization.md) | How values were read off a figure panel: target, axes, series, method, verification and confirmation |
| [17. Views](17-views.md) | Vega-Lite specifications that pin their data, and optional computations |
| [18. Layers and annotations](18-layers.md) | Layers and annotations |
| [19. Exercises, submissions and grades](19-exercises.md) | Exercises, submissions and grades |
| [20. Projects](20-projects.md) | Members and roles, documents, reading paths, held layers, datasets, views and drafts, and settings |
| [21. Drafts](21-drafts.md) | Drafts: snapshots and sentence-ID sidecars |
| [22. Conformance](22-conformance.md) | Conformance, the suite and the rule catalog |
| [23. The transparency log](23-log.md) | A team's log of receipts, revocations and rosters, its checkpoints, and what it settles |